| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.3.2 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.3.1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.2.0.1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_metaprosip/MetaProSIP/2.1.0 |
| MetaProSIP |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in_mzML: MetaProSIP_1_input.mzML in_fasta: MetaProSIP_1_input.fasta in_featureXML: MetaProSIP_1_input.featureXML mz_tolerance_ppm: 10.0 rt_tolerance_s: 30.0 intensity_threshold: 10.0 correlation_threshold: 0.7 xic_threshold: 0.7 decomposition_threshold: 0.7 weight_merge_window: 5.0 plot_extension: png qc_output_directory: labeling_element: C use_unassigned_ids: False use_averagine_ids: False report_natural_peptides: False filter_monoisotopic: False cluster: False adv_opts_cond|min_correlation_distance_to_averagine: -1.0 adv_opts_cond|pattern_15N_TIC_threshold: 0.95 adv_opts_cond|pattern_13C_TIC_threshold: 0.95 adv_opts_cond|pattern_2H_TIC_threshold: 0.95 adv_opts_cond|pattern_18O_TIC_threshold: 0.95 adv_opts_cond|heatmap_bins: 20 adv_opts_cond|observed_peak_fraction: 0.5 adv_opts_cond|min_consecutive_isotopes: 2 adv_opts_cond|score_plot_yaxis_min: 0.0 adv_opts_cond|collect_method: correlation_maximum adv_opts_cond|lowRIA_correlation_threshold: -1.0 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value name: value |
MetaProSIP_1_input.mzML MetaProSIP_1_input.fasta MetaProSIP_1_input.featureXML value |