Repository revision
5:b63b2bfb3ea3

Repository 'fastq_trimmer'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer

FASTQ Trimmer tool metadata
Miscellaneous
by column
fastq_trimmer
toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer/fastq_trimmer/1.1.5
1.1.5
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer/fastq_trimmer/1.1.5 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer/fastq_trimmer/1.1.1
toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer/fastq_trimmer/1.0.0
fastq_trimmer
Requirements (dependencies defined in the <requirements> tag set)
name version type
galaxy_sequence_utils 1.1.5 package
Functional tests
name inputs outputs required files
Test-1 offset_type|left_column_offset: 0
offset_type|base_offset_type: offsets_absolute
input_file: sanger_full_range_original_sanger.fastqsanger
offset_type|right_column_offset: 0
keep_zero_length: True
attributes: name
sanger_full_range_original_sanger.fastqsanger
name
Test-2 offset_type|left_column_offset: 30
offset_type|base_offset_type: offsets_absolute
input_file: sanger_full_range_original_sanger.fastqsanger
offset_type|right_column_offset: 64
keep_zero_length: False
attributes: name
sanger_full_range_original_sanger.fastqsanger
name
Test-3 offset_type|left_column_offset: 50
offset_type|base_offset_type: offsets_percent
input_file: sanger_full_range_original_sanger.fastqsanger
offset_type|right_column_offset: 50
keep_zero_length: False
attributes: name
sanger_full_range_original_sanger.fastqsanger
name
Test-4 offset_type|left_column_offset: 45
offset_type|base_offset_type: offsets_absolute
input_file: sanger_full_range_original_sanger.fastqsanger
offset_type|right_column_offset: 45
keep_zero_length: False
attributes: name
sanger_full_range_original_sanger.fastqsanger
name
Test-5 offset_type|left_column_offset: 47.87
offset_type|base_offset_type: offsets_percent
input_file: sanger_full_range_original_sanger.fastqsanger
offset_type|right_column_offset: 47.87
keep_zero_length: False
attributes: name
sanger_full_range_original_sanger.fastqsanger
name