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Repository revision

Revision: 9:6f281dc9d01c

Repository 'mothur_consensus_seqs'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_consensus_seqs

Consensus.seqs tool metadata

Miscellaneous

Name: Consensus.seqs

Description: Find a consensus sequence for each OTU or phylotype

Id: mothur_consensus_seqs

Guid: toolshed.g2.bx.psu.edu/repos/iuc/mothur_consensus_seqs/mothur_consensus_seqs/1.39.5.0

Version: 1.39.5.0

Version command string: mothur "#help()" | sed '7q;d' | cut -d" " -f2

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/mothur_consensus_seqs/mothur_consensus_seqs/1.39.5.0 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/mothur_consensus_seqs/mothur_consensus_seqs/1.36.1.0

mothur_consensus_seqs

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

mothur

1.39.5

package

Functional tests

name

inputs

outputs

required files

Test-1

fasta: amazon.align_head
savelog: True

name: value
name: value
name: value

amazon.align_head
value

Test-2

fasta: amazon.align_head
perotu|otu: amazon.align_head.list
perotu|use: yes
count: amazon.align_head.count_table
savelog: True

name: value

amazon.align_head
amazon.align_head.list
amazon.align_head.count_table
value