| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_multi_bam_summary/deeptools_multi_bam_summary/2.2.3.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_multi_bam_summary/deeptools_multi_bam_summary/2.2.2.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_multi_bam_summary/deeptools_multi_bam_summary/2.1.0.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_multi_bam_summary/deeptools_multi_bam_summary/2.0.1.0 |
| deeptools_multi_bam_summary |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 2.7.10 | package |
| multiBamSummary | not provided | binary |
| deepTools | 2.2.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mode|binSize: 10 bamfiles: ['bowtie2-test1.bam', 'bowtie2-test1.bam'] mode|modeOpt: bins |
outFile: multiBamSummary_result1.npz |
bowtie2-test1.bam multiBamSummary_result1.npz |
| Test-2 |
mode|region_file: multiBamSummary_regions.bed bamfiles: ['bowtie2-test1.bam', 'bowtie2-test1.bam'] mode|modeOpt: BED-file |
outFile: multiBamSummary_result2.npz |
bowtie2-test1.bam multiBamSummary_regions.bed multiBamSummary_result2.npz |