Repository revision
29:1aac2a13842a

Repository 'picard'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/picard

Collect Alignment Summary Metrics tool metadata
Miscellaneous
writes a file containing summary alignment metrics
picard_CASM
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CASM/2.18.2.1
2.18.2.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CASM/2.18.2.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CASM/1.126.0
picard_CASM
Requirements (dependencies defined in the <requirements> tag set)
name version type
picard 2.18.2 package
Functional tests
name inputs outputs required files
Test-1 inputFile: picard_CASM.bam
reference_source|ref_file: picard_CASM_ref.fa
reference_source|reference_source_selector: history
bisulphite: False
maxinsert: 100000
name: value
picard_CASM.bam
picard_CASM_ref.fa
value