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Repository revision

Revision: 33:3f254c5ced1d

Repository 'picard'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/picard

FixMateInformation tool metadata

Miscellaneous

Name: FixMateInformation

Description: ensure that all mate-pair information is in sync between each read and it's mate pair

Id: picard_FixMateInformation

Guid: toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/3.1.1.0

Version: 3.1.1.0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/3.1.1.0 (this tool)

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/2.18.2.1

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/2.18.2.0

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/2.7.1.0

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/1.136.0

toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FixMateInformation/1.126.0

picard_FixMateInformation

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

picard

3.1.1

package

Functional tests

name

inputs

outputs

required files

Test-1

inputFile: picard_FixMateInformation.bam
add_mate_cigar: True
assume_sorted: False
validation_stringency: LENIENT

name: value

picard_FixMateInformation.bam
value