Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_EstimateLibraryComplexity/2.18.2.1 (this tool) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_EstimateLibraryComplexity/2.18.2.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_EstimateLibraryComplexity/2.7.1.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_EstimateLibraryComplexity/1.136.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_EstimateLibraryComplexity/1.126.0 |
picard_EstimateLibraryComplexity |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
picard | 2.18.2 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
read_name_regex: [a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).*. max_diff_rate: 0.03 validation_stringency: LENIENT max_group_ratio: 500 optical_duplicate_pixel_distance: 100 min_mean_quality: 20 min_identical_bases: 5 inputFile: picard_EstimateLibraryComplexity.bam |
attributes: name |
picard_EstimateLibraryComplexity.bam name |