Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectGcBiasMetrics/2.7.1.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectGcBiasMetrics/1.136.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectGcBiasMetrics/1.126.0 |
picard_CollectGcBiasMetrics |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
picard | 1.136 | package |
R | 3.1.2 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
window_size: 100 reference_source|reference_source_selector: history assume_sorted: True is_bisulfite_sequenced: True minimum_genome_fraction: 0.00005 reference_source|ref_file: picard_CollectGcBiasMetrics_ref.fa inputFile: picard_CollectGcBiasMetrics.bam |
outFile: picard_CollectGcBiasMetrics_test1.tab |
picard_CollectGcBiasMetrics.bam picard_CollectGcBiasMetrics_ref.fa picard_CollectGcBiasMetrics_test1.tab |