| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/2.7.1.0 |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/1.136.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/1.126.0 |
| picard_CollectInsertSizeMetrics |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| picard | 1.136 | package |
| R | 3.1.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
deviations: 10.0 reference_source|reference_source_selector: history hist_width: 500 assume_sorted: True metric_accumulation_level: ALL_READS reference_source|ref_file: picard_CollectInsertSizeMetrics_ref.fa min_pct: 0.05 inputFile: picard_CollectInsertSizeMetrics.bam |
outFile: picard_CollectInsertSizeMetrics_test1.tab |
picard_CollectInsertSizeMetrics.bam picard_CollectInsertSizeMetrics_ref.fa picard_CollectInsertSizeMetrics_test1.tab |