Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FastqToSam/2.7.1.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FastqToSam/1.136.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FastqToSam/1.126.0 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FastqToSam/1.56.0 |
picard_FastqToSam |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
picard | 1.136 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
input_type|input_type_selector: pe library_name: A strip_unpairied_mate_number: False platform_unit: A description: A run_date: 2014-10-10 sequencing_center: A allow_and_ignore_empty_lines: False max_q: 93 quality_format: Standard comment: A predicted_insert_size: 300 platform: Illumina sample_name: sample-a input_type|fastq: picard_FastqToSam_read1.fq min_q: 0 input_type|fastq2: picard_FastqToSam_read2.fq read_group_name: A validation_stringency: LENIENT |
outFile: picard_FastqToSam_test1.bam |
picard_FastqToSam_read1.fq picard_FastqToSam_read2.fq picard_FastqToSam_test1.bam |