| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FilterSamReads/2.7.1.0 |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FilterSamReads/1.136.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_FilterSamReads/1.126.0 |
| picard_FilterSamReads |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| picard | 1.136 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
filter_type|filter: includeReadList filter_type|read_list_file: picard_FilterSamReads_read_list_file.tab validation_stringency: LENIENT inputFile: picard_FilterSamReads.bam |
outFile: picard_FilterSamReads_include_reads_test1.bam |
picard_FilterSamReads.bam picard_FilterSamReads_read_list_file.tab picard_FilterSamReads_include_reads_test1.bam |
| Test-2 |
filter_type|filter: excludeReadList filter_type|read_list_file: picard_FilterSamReads_read_list_file.tab validation_stringency: LENIENT inputFile: picard_FilterSamReads.bam |
outFile: picard_FilterSamReads_exclude_reads_test2.bam |
picard_FilterSamReads.bam picard_FilterSamReads_read_list_file.tab picard_FilterSamReads_exclude_reads_test2.bam |