Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/2.18.2.2 |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/2.18.2.1 (this tool) |
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_CollectInsertSizeMetrics/1.126.0 |
picard_CollectInsertSizeMetrics |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
picard | 2.18.2 | package |
r-base | 3.4.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
deviations: 10.0 reference_source|reference_source_selector: history hist_width: 500 assume_sorted: True metric_accumulation_level: ALL_READS reference_source|ref_file: picard_CollectInsertSizeMetrics_ref.fa min_pct: 0.05 inputFile: picard_CollectInsertSizeMetrics.bam |
attributes: name |
picard_CollectInsertSizeMetrics.bam picard_CollectInsertSizeMetrics_ref.fa name |