| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+galaxy92 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+galaxy91 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+galaxy9 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.8.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.7.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.6.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/1.6.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.1+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/anndata_ops/anndata_ops/0.0.1+galaxy0 |
| anndata_ops |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| scanpy-scripts | 1.1.3 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_obj_file: find_cluster.h5 |
name: value |
find_cluster.h5 value |
| Test-2 |
input_obj_file: anndata_ops.h5 var_modifications_0|from_var: gene_symbols var_modifications_0|to_var: hello_all |
name: value |
anndata_ops.h5 value |
| Test-3 |
input_obj_file: anndata_ops.h5 add_cell_metadata|file: test_incomplete_metadata.tsv add_cell_metadata|default: True |
name: value |
anndata_ops.h5 test_incomplete_metadata.tsv value |
| Test-4 |
input_obj_file: anndata_ops.h5 var_modifications_0|from_var: gene_symbols var_modifications_0|to_var: gene_symbols_unique var_modifications_0|make_unique: True |
name: value |
anndata_ops.h5 value |
| Test-5 |
input_obj_file: anndata_ops.h5 field_unique: gene_symbols |
name: value |
anndata_ops.h5 value |
| Test-6 |
input_obj_file: find_cluster.h5 copy_r|r_source: read_10x.h5 copy_r|default: True |
name: value |
find_cluster.h5 read_10x.h5 value |
| Test-7 |
input_obj_file: normalise_data.h5 copy_x|xlayers_0|x_source: filter_genes.h5 copy_x|xlayers_0|dest: filtered copy_x|default: True |
name: value |
normalise_data.h5 filter_genes.h5 value |
| Test-8 |
input_obj_file: find_cluster.h5 copy_l|layers_0|contains: filtered copy_l|layer_sources: anndata_ops_xlayer.h5 copy_l|default: True |
name: value |
find_cluster.h5 anndata_ops_xlayer.h5 value |