Repository revision
9:5a7674ac2c59

Repository 'mothur_seq_error'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_seq_error

Seq.error tool metadata
Miscellaneous
Seq.error
assess error rates in sequencing data
mothur_seq_error
toolshed.g2.bx.psu.edu/repos/iuc/mothur_seq_error/mothur_seq_error/1.39.5.0
1.39.5.0
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_seq_error/mothur_seq_error/1.39.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_seq_error/mothur_seq_error/1.36.1.0
mothur_seq_error
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Functional tests
name inputs outputs required files
Test-1 fasta_in: amazon.align_head
alignment|template: HMP_MOCK.v35.align
alignment|source: history
savelog: True
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
amazon.align_head
HMP_MOCK.v35.align
value
Test-2 fasta_in: Mock_S280_L001_R1_001_small.trim.contigs.good.align_head
alignment|template: HMP_MOCK.v35.align
alignment|source: history
qual|qfile_in: Mock_S280_L001_R1_001_small.trim.contigs.qual
qual|alignreport_in: Mock_S280_L001_R1_001_small.trim.contigs.good.align.report
qual|use: yes
savelog: True
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
name: value
Mock_S280_L001_R1_001_small.trim.contigs.good.align_head
HMP_MOCK.v35.align
Mock_S280_L001_R1_001_small.trim.contigs.qual
Mock_S280_L001_R1_001_small.trim.contigs.good.align.report
value