Repository revision
1:21ddefab2e4f

Repository 'revertr2orientationinbam'
hg clone https://toolshed.g2.bx.psu.edu/repos/lldelisle/revertr2orientationinbam

revertR2orientationInBam tool metadata
Miscellaneous
Revert the mapped orientation of R2 mates in a bam.
revertR2orientationInBam
toolshed.g2.bx.psu.edu/repos/lldelisle/revertr2orientationinbam/revertR2orientationInBam/0.0.2
0.0.2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/lldelisle/revertr2orientationinbam/revertR2orientationInBam/0.0.2 (this tool)
toolshed.g2.bx.psu.edu/repos/lldelisle/revertr2orientationinbam/revertR2orientationInBam/0.0.1
revertR2orientationInBam
Requirements (dependencies defined in the <requirements> tag set)
name version type
samtools 1.16.1 package
gawk 5.1.0 package
Functional tests
name inputs outputs required files
Test-1 input: input.sam
name: value
input.sam
value