Repository revision
0:4015e9d6d277

Repository 'format_cd_hit_output'
hg clone https://toolshed.g2.bx.psu.edu/repos/bebatut/format_cd_hit_output

Format cd-hit outputs tool metadata
Miscellaneous
Format cd-hit outputs
to rename representative sequences with cluster name and/or extract distribution inside clusters given a mapping file
format_cd_hit_output
toolshed.g2.bx.psu.edu/repos/bebatut/format_cd_hit_output/format_cd_hit_output/1.0.0
1.0.0
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bebatut/format_cd_hit_output/format_cd_hit_output/1.0.0+galaxy1
toolshed.g2.bx.psu.edu/repos/bebatut/format_cd_hit_output/format_cd_hit_output/1.0.0 (this tool)
format_cd_hit_output
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 extract_cat_distri|input_mapping: input_mapping.txt
input_cluster_info: input_cluster_info.txt
extract_cat_distri|extract_cat_distri_test: true
extract_cat_distri|number_sum: True
rename_repr_seq|input_representative_sequences: input_representative_sequences.fasta
rename_repr_seq|rename_repr_seq_test: true
 output_representative_sequences: rename_representative_sequences_output.fasta
output_category_distribution: extract_category_distribution_output.tabular
 input_cluster_info.txt
input_representative_sequences.fasta
input_mapping.txt
rename_representative_sequences_output.fasta
extract_category_distribution_output.tabular