| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.5.0+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.5.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.4.20+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.4.13+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.4.13 |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.3.1.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/racon/racon/1.3.1 |
| racon |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| racon | 1.5.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
reads: sample_reads.fasta overlaps: sample_overlaps.sam corrected_reads: sample_layout.fasta include_unpolished: True fragment_correction: True window_length: 800 error_threshold: 0.2 |
name: value |
sample_reads.fasta sample_overlaps.sam sample_layout.fasta value |
| Test-2 |
reads: sample_reads.fasta overlaps: sample_overlaps.paf corrected_reads: sample_layout.fasta |
name: value |
sample_reads.fasta sample_overlaps.paf sample_layout.fasta value |
| Test-3 |
reads: sample_reads.fasta overlaps: sample_overlaps.sam corrected_reads: sample_layout.fasta include_unpolished: False fragment_correction: False quality_threshold: 9.0 no_trimming: True match: 7 mismatch: -4 gap: -3 |
name: value |
sample_reads.fasta sample_overlaps.sam sample_layout.fasta value |