| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/salsa/salsa/2.3+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/iuc/salsa/salsa/2.3+galaxy2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/salsa/salsa/2.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/salsa/salsa/2.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/salsa/salsa/2.2+galaxy0 |
| salsa |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| salsa2 | 2.3 | package |
| samtools | 1.11 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fasta_in: test.fasta bed_file: test.bed cutoff: 1000 gfa_file: test.gfa1 enzyme_conditional|manual_enzyme: GATC,GANTC enzyme_conditional|enzyme_options: specific iter: 3 |
name: value name: value |
test.fasta test.bed test.gfa1 value |
| Test-2 |
fasta_in: test.fasta bed_file: test.bed cutoff: 1000 gfa_file: test.gfa1 enzyme_conditional|manual_enzyme: GATC,GANTC enzyme_conditional|enzyme_options: specific iter: 3 |
name: value name: value |
test.fasta test.bed test.gfa1 value |
| Test-3 |
fasta_in: test.fasta bed_file: test.bed cutoff: 1000 gfa_file: test.gfa1 enzyme_conditional|preconfigured_enzymes: arima1 enzyme_conditional|enzyme_options: preconfigured iter: 3 |
name: value name: value |
test.fasta test.bed test.gfa1 value |