| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.7+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.7+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.7+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.7+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.7+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.4+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.4+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.4 |
| fasterq_dump |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| sra-tools | 2.10.7 | package |
| pigz | 2.3.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input|input_select: accession_number input|accession: ERR086330 |
||
| Test-2 |
input|input_select: accession_number input|accession: SRR002702 adv|split: --split-files adv|skip_technical: False |
||
| Test-3 |
input|file: SRR522874.sra input|input_select: file adv|split: --split-files adv|skip_technical: True |
SRR522874.sra |
|
| Test-4 |
input|file: SRR522874.sra input|input_select: file adv|split: --split-files adv|skip_technical: False |
SRR522874.sra |
|
| Test-5 |
input|input_select: file_list adv|minlen: 21 input|file_list: list_sra |
list_sra |
|
| Test-6 |
input|input_select: file_list input|file_list: sra_manifest.tabular |
sra_manifest.tabular |
|
| Test-7 |
input|input_select: file_list input|file_list: sra_manifest.tabular |
sra_manifest.tabular |