| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/mothur_screen_seqs/mothur_screen_seqs/1.39.5.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/mothur_screen_seqs/mothur_screen_seqs/1.39.5.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/mothur_screen_seqs/mothur_screen_seqs/1.36.1.0 |
| mothur_screen_seqs |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| mothur | 1.39.5 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fasta: Mock_S280_L001_R1_001_small.trim.contigs.fasta maxlength: 275 maxambig: 0 savelog: True |
name: value name: value name: value |
Mock_S280_L001_R1_001_small.trim.contigs.fasta value |
| Test-2 |
fasta: amazon.fasta maxlength: 500 maxambig: 0 count: amazon1.count_table savelog: True |
name: value name: value name: value name: value |
amazon.fasta amazon1.count_table value |
| Test-3 |
fasta: Mock_S280_L001_R1_001_small.trim.contigs.fasta maxlength: 275 maxambig: 0 contigsrep|contigsreport: Mock_S280_L001_R1_001_small.contigs.report contigsrep|mismatches: 18 contigsrep|usecontigs: yes savelog: True |
name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.trim.contigs.fasta Mock_S280_L001_R1_001_small.contigs.report value |
| Test-4 |
fasta: Mock_S280_L001_R1_001_small.trim.contigs.good.fasta maxlength: 275 maxambig: 0 alignrep|alignreport: Mock_S280_L001_R1_001_small.trim.contigs.good.align.report alignrep|minscore: 100 alignrep|usealign: yes savelog: True |
name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.trim.contigs.good.fasta Mock_S280_L001_R1_001_small.trim.contigs.good.align.report value |