Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_contigs/mothur_make_contigs/1.39.5.1 |
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_contigs/mothur_make_contigs/1.39.5.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_contigs/mothur_make_contigs/1.36.1.0 |
mothur_make_contigs |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
mothur | 1.39.5 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
input_type|forward_fastq: Mock_S280_L001_R1_001_small.fastq input_type|reverse_fastq: Mock_S280_L001_R2_001_small.fastq input_type|type: regular savelog: True |
name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.fastq Mock_S280_L001_R2_001_small.fastq value |
Test-2 |
input_type|paired_collection: paired collection input_type|type: simple_collection savelog: True |
name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.fastq Mock_S280_L001_R2_001_small.fastq value |
Test-3 |
input_type|paired_collection: paired collection input_type|type: simple_collection align: gotoh match: 2 mismatch: -2 gapopen: -3 gapextend: -2 savelog: True |
name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.fastq Mock_S280_L001_R2_001_small.fastq value |
Test-4 |
input_type|list_paired_collection: list:paired collection input_type|type: list_collection savelog: True |
name: value name: value name: value name: value name: value |
Mock_S280_L001_R1_001_small.fastq Mock_S280_L001_R2_001_small.fastq test_forward.fastq test_reverse.fastq value |