| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/erasmus-medical-center/miniasm/miniasm/0.2.0 (this tool) |
| miniasm |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| miniasm | 0.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
readFile: mini_reads.fq paf: mini_reads.paf.gz |
attributes: name |
mini_reads.fq mini_reads.paf.gz name |
| Test-2 |
graph|maxGapDiff: 999 overlapping|intThres: 0.7 preselection|minIden: 0.04 preselection|minMatch: 99 readFile: mini_reads.fq overlapping|minOvlp: 999 graph|finalDropRatio: 0.7 preselection|minSpan: 999 paf: mini_reads.paf.gz overlapping|maxHang: 999 graph|maxBubDist: 45000 graph|nRounds: 2 graph|minUtgSize: 3 preselection|minCov: 2 |
attributes: name |
mini_reads.fq mini_reads.paf.gz name |