Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_qualitycontrol/QualityControl/2.8+galaxy0 |
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_qualitycontrol/QualityControl/2.6+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_qualitycontrol/QualityControl/2.5+galaxy0 |
QualityControl |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
openms | 2.6 | package |
openms-thirdparty | 2.6 | package |
blast | 2.9.0 | package |
ctdopts | 1.4 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
in_cm: QualityControl_1_in.consensusXML in_raw: ['QualityControl_1_in1.mzML.gz', 'QualityControl_1_in2.mzML.gz', 'QualityControl_1_in3.mzML.gz'] in_postFDR: ['QualityControl_1_in1.featureXML', 'QualityControl_1_in2.featureXML', 'QualityControl_1_in3.featureXML'] in_contaminants: QualityControl_1.fasta in_trafo: ['QualityControl_1_in1.trafoXML', 'QualityControl_1_in2.trafoXML', 'QualityControl_1_in3.trafoXML'] FragmentMassError|unit: auto FragmentMassError|tolerance: 20.0 MS2_id_rate|assume_all_target: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_FLAG', 'out_cm_FLAG'] |
name: value name: value name: value |
QualityControl_1_in.consensusXML QualityControl_1_in1.mzML.gz QualityControl_1_in2.mzML.gz QualityControl_1_in3.mzML.gz QualityControl_1_in1.featureXML QualityControl_1_in2.featureXML QualityControl_1_in3.featureXML QualityControl_1.fasta QualityControl_1_in1.trafoXML QualityControl_1_in2.trafoXML QualityControl_1_in3.trafoXML value |