Repository revision
2:9c8ff1bdd041

Repository 'miranda'
hg clone https://toolshed.g2.bx.psu.edu/repos/earlhaminst/miranda

miRanda tool metadata
Miscellaneous
miRanda
finds potential target sites for miRNAs in genomic sequences
miranda
toolshed.g2.bx.psu.edu/repos/earlhaminst/miranda/miranda/3.3a+galaxy1
3.3a+galaxy1
miranda --version|grep 'miranda v'
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/earlhaminst/miranda/miranda/3.3a+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/earlhaminst/miranda/miranda/3.3a
miranda
Requirements (dependencies defined in the <requirements> tag set)
name version type
miranda 3.3a package
python 3.9 package
Additional information about this tool
miranda '$microrna' '$query'
#if str($sc)
    -sc $sc
#end if
#if str($en)
    -en $en
#end if
-out '$raw_output'
&&
python '$__tool_directory__/miranda_parser.py' '$raw_output' '$tabular_output'
    
None
False
Functional tests
name inputs outputs required files
Test-1 microrna: microrna.fasta
query: query.fasta
name: value
microrna.fasta
query.fasta
value