Repository revision
1:6baac361495b

Repository 'xarray_select'
hg clone https://toolshed.g2.bx.psu.edu/repos/ecology/xarray_select

NetCDF xarray Selection tool metadata
Miscellaneous
extracts variable values with custom conditions on dimensions
xarray_select
toolshed.g2.bx.psu.edu/repos/ecology/xarray_select/xarray_select/0.15.1
0.15.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ecology/xarray_select/xarray_select/0.18.2+galaxy0
toolshed.g2.bx.psu.edu/repos/ecology/xarray_select/xarray_select/0.15.1 (this tool)
xarray_select
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 3 package
netcdf4 1.5.3 package
xarray 0.15.1 package
geopandas 0.7.0 package
shapely 1.7.0 package
Functional tests
name inputs outputs required files
Test-1 input: dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc
var_tab: var_tab_dataset-ibi
var: phy
condi_source_coord|condi_coord|lat_dim: latitude
condi_source_coord|condi_coord|lat_val: 44.0
condi_source_coord|condi_coord|lon_dim: longitude
condi_source_coord|condi_coord|lon_val: -2.0
condi_source_coord|condi_coord|coord: single
condi_source_coord|coord_source: coord_from_stdin
name: value
dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc
var_tab_dataset-ibi
value
Test-2 input: dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc
var_tab: var_tab_dataset-ibi
var: nh4
condi_source_coord|condi_coord|coord: global
condi_source_coord|coord_source: coord_from_stdin
time|condi_datetime|condi_between|t1: 2003-12-15
time|condi_datetime|condi_between|t2: 2004-12-15
time|condi_datetime|condi_between|comparator: sl
time|condi_datetime|datetime: yes
user_choice_0|dim: nh4
user_choice_0|condi_between|value: 50.
user_choice_0|condi_between|comparator: ge
name: value
dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc
var_tab_dataset-ibi
value