Repository revision
39:a7067bbf1e58

Repository 'sklearn_clf_metrics'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics

Calculate metrics tool metadata
Miscellaneous
for classification performance
sklearn_clf_metrics
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.8.3
1.0.8.3
echo "1.0.8.3"
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.8.4
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.8.3 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.8.2
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.8.1
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.7.12
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.7.10
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0.0.4
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/1.0
toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_clf_metrics/sklearn_clf_metrics/0.9
sklearn_clf_metrics
Requirements (dependencies defined in the <requirements> tag set)
name version type
Galaxy-ML 0.8.3 package
Functional tests
name inputs outputs required files
Test-1 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: accuracy_score
name: value
y.tabular
value
Test-2 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: classification_report
name: value
y.tabular
value
Test-3 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|average: micro
clf_metrics|selected_metric: f1_score
name: value
y.tabular
value
Test-4 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|average: micro
clf_metrics|selected_metric: fbeta_score
name: value
y.tabular
value
Test-5 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: hamming_loss
name: value
y.tabular
value
Test-6 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: jaccard_similarity_score
name: value
y.tabular
value
Test-7 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|average: micro
clf_metrics|selected_metric: precision_recall_fscore_support
name: value
y.tabular
value
Test-8 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|average: micro
clf_metrics|selected_metric: precision_score
name: value
y.tabular
value
Test-9 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|average: micro
clf_metrics|selected_metric: recall_score
name: value
y.tabular
value
Test-10 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: zero_one_loss
name: value
y.tabular
value
Test-11 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|options|reorder: True
clf_metrics|selected_metric: auc
name: value
y.tabular
value
Test-12 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 4
clf_metrics|selected_metric: brier_score_loss
name: value
y.tabular
value
Test-13 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 7
clf_metrics|selected_metric: matthews_corrcoef
name: value
y.tabular
value
Test-14 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 2
clf_metrics|selected_metric: confusion_matrix
name: value
y.tabular
value
Test-15 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 7
clf_metrics|selected_metric: precision_recall_curve
name: value
y.tabular
value
Test-16 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 7
clf_metrics|selected_metric: roc_curve
name: value
y.tabular
value
Test-17 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 1
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: ['8', '9', '10']
clf_metrics|selected_metric: hinge_loss
name: value
y.tabular
value
Test-18 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 2
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: ['3', '4', '5']
clf_metrics|selected_metric: log_loss
name: value
y.tabular
value
Test-19 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 7
clf_metrics|selected_metric: average_precision_score
name: value
y.tabular
value
Test-20 clf_metrics|infile1: y.tabular
clf_metrics|column_selector_options_1|col1: 6
clf_metrics|infile2: y.tabular
clf_metrics|column_selector_options_2|col2: 7
clf_metrics|selected_metric: roc_auc_score
name: value
y.tabular
value