| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_fileconverter/FileConverter/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_fileconverter/FileConverter/2.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_fileconverter/FileConverter/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_fileconverter/FileConverter/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_fileconverter/FileConverter/2.1.0 |
| FileConverter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.5 | package |
| openms-thirdparty | 2.5 | package |
| blast | 2.9.0 | package |
| openjdk | 8.0.192 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: FileConverter_1_input.mzData out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_1_input.mzData value |
| Test-2 |
in: FileConverter_2_input.someInputDTA2D out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_2_input.someInputDTA2D value |
| Test-3 |
in: FileConverter_3_input.featureXML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_3_input.featureXML value |
| Test-4 |
in: FileConverter_4_input.mzXML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_4_input.mzXML value |
| Test-5 |
in: FileConverter_5_input.mzML out_type: mzXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_5_input.mzML value |
| Test-6 |
in: FileConverter_6_input.mzML out_type: mzXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_6_input.mzML value |
| Test-7 |
in: FileConverter_7_input.consensusXML out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_7_input.consensusXML value |
| Test-8 |
in: FileConverter_8_input.mzML out_type: mzData adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_8_input.mzML value |
| Test-9 |
in: FileConverter_9_input.consensusXML out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_9_input.consensusXML value |
| Test-10 |
in: FileConverter_10_input.edta out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_10_input.edta value |
| Test-11 |
in: FileConverter_11_input.peplist out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_11_input.peplist value |
| Test-12 |
in: FileConverter_12_input.peptides.tsv out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_12_input.peptides.tsv value |
| Test-13 |
in: FileConverter_13_input.peptides.kroenik out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_13_input.peptides.kroenik value |
| Test-14 |
in: FileConverter_9_output.featureXML out_type: consensusXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_9_output.featureXML value |
| Test-15 |
in: FileConverter_10_input.edta out_type: consensusXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_10_input.edta value |
| Test-16 |
in: FileConverter_16_input.edta out_type: consensusXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_16_input.edta value |
| Test-17 |
in: FileConverter_17_input.consensusXML out_type: csv adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_17_input.consensusXML value |
| Test-18 |
in: FileConverter_17_input.consensusXML out_type: csv adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_17_input.consensusXML value |
| Test-19 |
in: FileFilter_1_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: True adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileFilter_1_input.mzML value |
| Test-20 |
in: FileConverter_20_input.featureXML out_type: featureXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_20_input.featureXML value |
| Test-21 |
in: FileConverter_4_input.mzXML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: True adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_4_input.mzXML value |
| Test-22 |
in: FileConverter_23_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_23_input.mzML value |
| Test-23 |
in: FileFilter_1_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: True adv_opts_cond|lossy_mass_accuracy: 0.0001 adv_opts_cond|process_lowmemory: True adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileFilter_1_input.mzML value |
| Test-24 |
in: FileFilter_1_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: True adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: True adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileFilter_1_input.mzML value |
| Test-25 |
in: FileFilter_1_input.mzML out_type: mzXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: True adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileFilter_1_input.mzML value |
| Test-26 |
in: FileConverter_26_output.mzXML out_type: mzXML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: True adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_26_output.mzXML value |
| Test-27 |
in: FileConverter_27_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: True adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_27_input.mzML value |
| Test-28 |
in: FileConverter_28_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: True adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_28_input.mzML value |
| Test-29 |
in: OpenSwathWorkflow_17_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: True adv_opts_cond|lossy_mass_accuracy: 1e-05 adv_opts_cond|process_lowmemory: True adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
OpenSwathWorkflow_17_input.mzML value |
| Test-30 |
in: FileConverter_29_output.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_29_output.mzML value |
| Test-31 |
in: FileConverter_30_input.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: multiple adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_30_input.mzML value |
| Test-32 |
in: FileConverter_30_output.mzML out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: single adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FileConverter_30_output.mzML value |
| Test-33 |
in: ginkgotoxin-ms-switching.raw out_type: mzML adv_opts_cond|UID_postprocessing: ensure adv_opts_cond|TIC_DTA2D: False adv_opts_cond|MGF_compact: False adv_opts_cond|force_MaxQuant_compatibility: False adv_opts_cond|convert_to_chromatograms: False adv_opts_cond|force_TPP_compatibility: False adv_opts_cond|change_im_format: none adv_opts_cond|write_scan_index: True adv_opts_cond|lossy_compression: False adv_opts_cond|lossy_mass_accuracy: -1.0 adv_opts_cond|process_lowmemory: False adv_opts_cond|no_peak_picking: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ginkgotoxin-ms-switching.raw value |
| Test-34 |
in: FileConverter_1_input.mzData out_type: mzML |
name: value |
FileConverter_1_input.mzData value |