| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/dexseq/dexseq_count/1.44+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/dexseq/dexseq_count/1.0 |
| dexseq_count |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bioconductor-dexseq | 1.44 | package |
| r-getopt | 1.20.3 | package |
| r-rjson | 0.2.21 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mode|gtffile: original.gtf mode|aggregate: True mode|mode_select: prepare |
name: value |
original.gtf value |
| Test-2 |
mode|bamfile: in.bam mode|flattened_gtf_in: flattened.gtf mode|stranded: no mode|mode_select: count |
name: value |
in.bam flattened.gtf value |