Repository revision
0:581e52f03c5d

Repository 'pear'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/pear

Pear tool metadata
Miscellaneous
Pear
Paired-End read merger
iuc_pear
toolshed.g2.bx.psu.edu/repos/iuc/pear/iuc_pear/0.9.6.0
0.9.6.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/pear/iuc_pear/0.9.6.1
toolshed.g2.bx.psu.edu/repos/iuc/pear/iuc_pear/0.9.6.0 (this tool)
iuc_pear
Requirements (dependencies defined in the <requirements> tag set)
name version type
pear 0.9.6 package
Functional tests
name inputs outputs required files
Test-1 library|forward: forward.fastq
min_overlap: 10
library|reverse: reverse.fastq
outputs: ['assembled', 'forward']
cap: 0
min_assembly_length: 50
assembled_reads: pear_assembled_results1.fastq
unassembled_forward_reads: pear_unassembled_forward_results1.fastq
forward.fastq
reverse.fastq
pear_assembled_results1.fastq
pear_unassembled_forward_results1.fastq