Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/tetyper/tetyper/1.1+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/tetyper/tetyper/1.1+galaxy1 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/tetyper/tetyper/1.1+galaxy0 |
tetyper |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
tetyper | 1.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
collection_paired|forward_input: ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq collection_paired|reverse_input: ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq collection_paired|selector: paired reference: Tn4401b-1.fasta |
name: value |
ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq Tn4401b-1.fasta value |
Test-2 |
collection_paired|forward_input: ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq collection_paired|reverse_input: ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq collection_paired|selector: paired snp_profiles_source|snp_profiles: Tn4401b_snp_profiles.txt snp_profiles_source|snp_profiles_source_selector: history struct_profiles_source|struct_profiles: Tn4401b_struct_profiles.txt struct_profiles_source|struct_profiles_source_selector: history reference: Tn4401b-1.fasta |
name: value |
ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq Tn4401b_snp_profiles.txt Tn4401b_struct_profiles.txt Tn4401b-1.fasta value |
Test-3 |
collection_paired|forward_input: ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq collection_paired|reverse_input: ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq collection_paired|selector: paired snp_profiles_source|snp_profiles: Tn4401b_snp_profiles snp_profiles_source|snp_profiles_source_selector: tool_data_table struct_profiles_source|struct_profiles: Tn4401b_struct_profiles struct_profiles_source|struct_profiles_source_selector: tool_data_table reference: Tn4401b-1.fasta |
name: value |
ERR1911133_Tn4401b-1_mapped_subsampled_1.fastq ERR1911133_Tn4401b-1_mapped_subsampled_2.fastq Tn4401b-1.fasta value |