Repository revision
0:b126ea31824f

Repository 'repet_teannot'
hg clone https://toolshed.g2.bx.psu.edu/repos/vmarcon/repet_teannot

REPET Lite - TEannot tool metadata
Miscellaneous
Genome annotation for masking transposable elements
teannot
toolshed.g2.bx.psu.edu/repos/vmarcon/repet_teannot/teannot/1.5.0
1.5.0
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/vmarcon/repet_teannot/teannot/1.5.0 (this tool)
teannot
Requirements (dependencies defined in the <requirements> tag set)
name version type
python not provided binary
repet 2.5 package
Functional tests
name inputs outputs required files
Test-1 fasta: alignment.fa
library: libTE.fa
outputfile: None
outputmaskedfile: None
outputstatsfile: None
outputlog: None
outputconfig: None
alignment.fa
libTE.fa
Test-2 withStats: no
fasta: alignment.fa
classif: libTE.classif
library: libTE.fa
outputfile: None
outputmaskedfile: None
outputlog: None
outputconfig: None
alignment.fa
libTE.fa
libTE.classif