| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/ppanggolin_all/ppanggolin_all/2.2.1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/ppanggolin_all/ppanggolin_all/2.2.1+galaxy0 (this tool) |
| ppanggolin_all |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| ppanggolin | 2.2.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
genomes: ['fasta/AP028611_984801_1194801.fasta.gz', 'fasta/CP107038_1022972_1232972.fasta.gz', 'fasta/CP113115_1290693_1440693.fasta.gz', 'fasta/LN831051_1254175_1464175.fasta.gz', 'fasta/NC_012467_959209_1169209.fasta.gz'] identity: 0.8 coverage: 0.8 nb_of_partitions: 3 translation_table: 1 |
name: value name: value |
fasta/AP028611_984801_1194801.fasta.gz fasta/CP107038_1022972_1232972.fasta.gz fasta/CP113115_1290693_1440693.fasta.gz fasta/LN831051_1254175_1464175.fasta.gz fasta/NC_012467_959209_1169209.fasta.gz value |
| Test-2 |
genomes: ['genbank/AP028611_984801_1194801.gb.gz', 'genbank/CP107038_1022972_1232972.gb.gz', 'genbank/CP113115_1290693_1440693.gb.gz', 'genbank/LN831051_1254175_1464175.gb.gz', 'genbank/NC_012467_959209_1169209.gb.gz'] identity: 0.8 coverage: 0.8 nb_of_partitions: 3 translation_table: 1 |
name: value name: value |
genbank/AP028611_984801_1194801.gb.gz genbank/CP107038_1022972_1232972.gb.gz genbank/CP113115_1290693_1440693.gb.gz genbank/LN831051_1254175_1464175.gb.gz genbank/NC_012467_959209_1169209.gb.gz value |
| Test-3 |
genomes: ['genbank/AP028611_984801_1194801.gb.gz', 'genbank/CP107038_1022972_1232972.gb.gz', 'genbank/CP113115_1290693_1440693.gb.gz', 'fasta/AP028611_984801_1194801.fasta.gz', 'fasta/CP107038_1022972_1232972.fasta.gz', 'fasta/CP113115_1290693_1440693.fasta.gz'] identity: 0.8 coverage: 0.8 nb_of_partitions: 3 translation_table: 1 |
genbank/AP028611_984801_1194801.gb.gz genbank/CP107038_1022972_1232972.gb.gz genbank/CP113115_1290693_1440693.gb.gz fasta/AP028611_984801_1194801.fasta.gz fasta/CP107038_1022972_1232972.fasta.gz fasta/CP113115_1290693_1440693.fasta.gz |