Repository revision
1:5adf9db15edc

Repository 'assembly'
hg clone https://toolshed.g2.bx.psu.edu/repos/cole_easson/assembly

velvetg tool metadata
Miscellaneous
velvetg
Velvet sequence assembler for very short reads
velvetg
toolshed.g2.bx.psu.edu/repos/cole_easson/assembly/velvetg/1.2.10.0
1.2.10.0
velvetg 2>&1 | grep "Version" | sed -e 's/Version //'
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/cole_easson/assembly/velvetg/1.2.10.0 (this tool)
velvetg
Requirements (dependencies defined in the <requirements> tag set)
name version type
velvet 1.2.10 package
Functional tests
name inputs outputs required files
Test-1 reads|paired: no
expected|coverage: auto
read_trkg: False
generate_amos|afg: yes
contig_lgth|use_contig_lgth: no
input: velveth_test1/output.html
last_graph|generate_graph: no
coverage|cutoff: auto
unused_reads|generate_unused: yes
velvet_asm: amos.afg
unused_reads_fasta: unusedreads.fa
stats: stats.csv
contigs: contigs.fa
velveth_test1/output.html
velvetg_test1/amos.afg
velvetg_test1/unusedreads.fa
velvetg_test1/stats.csv
velvetg_test1/contigs.fa