Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_variant_pipeline/medaka_variant_pipeline/1.0.3+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_variant_pipeline/medaka_variant_pipeline/1.0.3+galaxy1 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_variant_pipeline/medaka_variant_pipeline/1.0.3+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_variant_pipeline/medaka_variant_pipeline/1.0.1+galaxy0 |
medaka_variant_pipeline |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
medaka | 1.0.3 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
i: alignment.bam reference_source|ref_file: bwa-mem-mt-genome reference_source|reference_source_selector: cached out: ['round_0_hap_mixed_probs_hdf', 'round_0_hap_mixed_unphased_vcf', 'log'] |
name: value name: value name: value |
alignment.bam value |