Repository revision
9:21a043c3ae00

Repository 'mothur_collect_shared'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_collect_shared

Collect.shared tool metadata
Miscellaneous
Generate collector's curves for calculators on OTUs
mothur_collect_shared
toolshed.g2.bx.psu.edu/repos/iuc/mothur_collect_shared/mothur_collect_shared/1.39.5.0
1.39.5.0
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_collect_shared/mothur_collect_shared/1.39.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_collect_shared/mothur_collect_shared/1.36.1.0
mothur_collect_shared
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Functional tests
name inputs outputs required files
Test-1 otu: amazon.an.shared
savelog: True
name: value
amazon.an.shared
value
Test-2 otu: amazon.an.shared
label: ['0.03', '0.05', '0.22']
groups: ['forest', 'pasture']
calc: ['sharedsobs', 'sharedchao', 'sharedace', 'anderberg', 'jclass', 'jest', 'kulczynski', 'kulczynskicody', 'kstest', 'lennon', 'ochiai', 'sorclass', 'sorest', 'whittaker', 'hamming', 'memchi2', 'memchord', 'memeuclidean', 'mempearson', 'braycurtis', 'jabund', 'morisitahorn', 'sorabund', 'thetan', 'thetayc', 'canberra', 'gower', 'hellinger', 'manhattan', 'odum', 'soergel', 'spearman', 'speciesprofile', 'structchi2', 'structchord', 'structeuclidean', 'structkulczynski', 'structpearson', 'sharednseqs']
savelog: True
name: value
amazon.an.shared
value