Repository revision
16:495a4173006f

Repository 'macs2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/macs2

MACS2 bdgdiff tool metadata
Miscellaneous
Differential peak detection based on paired four bedgraph files
macs2_bdgdiff
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgdiff/2.1.1.20160309.1
2.1.1.20160309.1
macs2 --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgdiff/2.2.7.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgdiff/2.1.1.20160309.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgdiff/2.1.0.20140616.0
macs2_bdgdiff
Requirements (dependencies defined in the <requirements> tag set)
name version type
macs2 2.1.1.20160309 package
r-base 3.4 package
gawk 4.1.3 package
Functional tests
name inputs outputs required files
Test-1 cutoff: 1.0
minlen: 200
maxgap: 100
t2: bdgdiff_t2.bdg
t1: bdgdiff_t1.bdg
c2: bdgdiff_c2.bdg
depth|depth1: 10
c1: bdgdiff_c1.bdg
depth|depth2: 1
attributes: name
attributes: name
attributes: name
bdgdiff_t1.bdg
bdgdiff_t2.bdg
bdgdiff_c1.bdg
bdgdiff_c2.bdg
name