Repository revision
16:495a4173006f

Repository 'macs2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/macs2

MACS2 bdgpeakcall tool metadata
Miscellaneous
Call peaks from bedGraph output
macs2_bdgpeakcall
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgpeakcall/2.1.1.20160309.0
2.1.1.20160309.0
macs2 --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgpeakcall/2.2.7.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgpeakcall/2.1.1.20160309.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgpeakcall/2.1.0.20151222.0
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_bdgpeakcall/2.1.0.20140616.0
macs2_bdgpeakcall
Requirements (dependencies defined in the <requirements> tag set)
name version type
macs2 2.1.1.20160309 package
r-base 3.4 package
Functional tests
name inputs outputs required files
Test-1 maxgap: 30
cutoff: 5.0
infile: bdgpeakcall_input.bdg
minlen: 200
attributes: name
bdgpeakcall_input.bdg
name
Test-2 maxgap: 30
cutoff: 5.0
cutoff_analysis: True
infile: bdgpeakcall_input.bdg
minlen: 200
attributes: name
bdgpeakcall_input.bdg
name