Repository revision
16:495a4173006f

Repository 'macs2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/macs2

MACS2 predictd tool metadata
Miscellaneous
Predict 'd' or fragment size from alignment results
macs2_predictd
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.1.20160309.0
2.1.1.20160309.0
macs2 --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.1.20160309.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.0.20140616.0
macs2_predictd
Requirements (dependencies defined in the <requirements> tag set)
name version type
macs2 2.1.1.20160309 package
r-base 3.4 package
Functional tests
name inputs outputs required files
Test-1 tsize:
effective_genome_size_options|gsize: 3300000000
infiles: ['Control_200K.bed', 'ChIP_200K.bed']
mfold|lower: 5
mfold|upper: 50
effective_genome_size_options|effective_genome_size_options_selector: user_defined
band_width: 300
attributes: name
attributes: name
Control_200K.bed
ChIP_200K.bed
name