| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.0.20151222.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.0.20140616.0 |
| macs2_predictd |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| macs2 | 2.1.0.20151222 | package |
| numpy | 1.7.1 | package |
| scipy | 0.12.0 | package |
| R | 3.1.2 | package |
| gnu_awk | 4.1.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mfoldlo: 5 tsize: -1.0 effective_genome_size_options|gsize: 3300000000 infiles: ['Control_200K.bed', 'ChIP_200K.bed'] effective_genome_size_options|effective_genome_size_options_selector: user_defined mfoldhi: 50 band_width: 300 |
outfile: predictd_on_ChIP_200K_and_Control_200K.txt outfile_image: predictd_on_ChIP_200K_and_Control_200K.pdf |
Control_200K.bed ChIP_200K.bed predictd_on_ChIP_200K_and_Control_200K.txt predictd_on_ChIP_200K_and_Control_200K.pdf |