Repository revision
7:f5d67c722d67

Repository 'macs2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/macs2

MACS2 predictd tool metadata
Miscellaneous
Predict 'd' or fragment size from alignment results
macs2_predictd
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.1.20160309.0
2.1.1.20160309.0
macs2 --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.1.20160309.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_predictd/2.1.0.20140616.0
macs2_predictd
Requirements (dependencies defined in the <requirements> tag set)
name version type
macs2 2.1.1.20160309 package
Functional tests
name inputs outputs required files
Test-1 tsize:
effective_genome_size_options|gsize: 3300000000
effective_genome_size_options|effective_genome_size_options_selector: user_defined
infiles: ['Control_200K.bed', 'ChIP_200K.bed']
mfold|upper: 50
mfold|lower: 5
band_width: 300
outfile: predictd_on_ChIP_200K_and_Control_200K.txt
outfile_image: predictd_on_ChIP_200K_and_Control_200K.pdf
Control_200K.bed
ChIP_200K.bed
predictd_on_ChIP_200K_and_Control_200K.txt
predictd_on_ChIP_200K_and_Control_200K.pdf