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Repository revision

Revision: 5:68ed36eed6c5

Repository 'msp_oases'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases

Oases_optimiser tool metadata

Miscellaneous

Name: Oases_optimiser

Description: Auto optimise de novo RNA-seq Oases/Velvet assembly

Id: oasesoptimiserv

Guid: toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.2.1

Version: 1.2.1

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.2.1 (this tool)

toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.5

toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.4

toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.3

toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.0

oasesoptimiserv

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

oases

0.2.09

package

velvet

1.2.10

package

Functional tests

name

inputs

outputs

required files

Test-1

end_hash_length: 35
inputs_0|input: input.fa
start_hash_length: 15

transcripts: None

input.fa