Repository revision
0:63f6f42d112b

Repository 'bamhash'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/bamhash

BamHash tool metadata
Miscellaneous
BamHash
Hash BAM and FASTQ files to verify data integrity
bamhash
toolshed.g2.bx.psu.edu/repos/bgruening/bamhash/bamhash/1.1
1.1
bamhash_checksum_fastq --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/bamhash/bamhash/1.1 (this tool)
bamhash
Requirements (dependencies defined in the <requirements> tag set)
name version type
bamhash 1.1 package
Functional tests
name inputs outputs required files
Test-1 tool|input_bam: Example.bam
tool|tool_choice: bam
output: output1_bam.txt
Example.bam
output1_bam.txt
Test-2 tool|input_fasta: UnAligSeq24606.fasta
readnames: True
tool|tool_choice: fasta
output: output2_fasta.txt
UnAligSeq24606.fasta
output2_fasta.txt
Test-3 tool|input_fastq: ['1_mismatch.fastq', '2_mismatch.fastq']
tool|tool_choice: fastq
output: output3_fastq.txt
1_mismatch.fastq
2_mismatch.fastq
output3_fastq.txt
Test-4 tool|input_fastq: ['1_mismatch.fastq', '2_mismatch.fastq']
tool|tool_choice: fastq
output: output4_fastq.txt
1_mismatch.fastq
2_mismatch.fastq
output4_fastq.txt