Repository revision
3:7adddc6015c1

Repository 'interval2maf'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/interval2maf

Extract MAF blocks tool metadata
Miscellaneous
given a set of genomic intervals
Interval2Maf1
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1+galaxy1
1.0.1+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1
Interval2Maf1
Requirements (dependencies defined in the <requirements> tag set)
name version type
bx-python 0.8.9 package
galaxy-data 22.1.1 package
Functional tests
name inputs outputs required files
Test-1 input1: interval2maf-in.bed
maf_source_type|mafFile: interval2maf-in1.maf
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: user
split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
name: value
interval2maf-in.bed
interval2maf-in1.maf
value
Test-2 input1: interval2maf-in.bed
maf_source_type|mafType: TEST
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: cached
split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
name: value
interval2maf-in.bed
value
Test-3 input1: interval2maf-in.bed
maf_source_type|mafType: TEST
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: cached
split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
name: value
interval2maf-in.bed
value