Repository revision
0:cfea1d6354db

Repository 'interval2maf'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/interval2maf

Extract MAF blocks tool metadata
Miscellaneous
given a set of genomic intervals
Interval2Maf1
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1
1.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/interval2maf/Interval2Maf1/1.0.1 (this tool)
Interval2Maf1
Requirements (dependencies defined in the <requirements> tag set)
name version type
bx-python 0.8.9 package
Functional tests
name inputs outputs required files
Test-1 split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
maf_source_type|mafFile: interval2maf-in1.maf
input1: interval2maf-in1.bed
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: user
attributes: name
interval2maf-in1.bed
interval2maf-in1.maf
name
Test-2 split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
input1: interval2maf-in2.bed
maf_source_type|mafType: TEST
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: cached
attributes: name
interval2maf-in2.bed
name
Test-3 split_blocks_by_species_selector|split_blocks_by_species: dont_split_blocks_by_species
input1: interval2maf-in3.bed
maf_source_type|mafType: TEST
maf_source_type|species: ['hg38', 'mm10', 'eulFla1']
maf_source_type|maf_source: cached
attributes: name
interval2maf-in3.bed
name