Repository revision
12:fa016f1eea1a

Repository 'snippy'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snippy

snippy-clean_full_aln tool metadata
Miscellaneous
Replace any non-standard sequence characters in snippy 'core.full.aln' file.
snippy_clean_full_aln
toolshed.g2.bx.psu.edu/repos/iuc/snippy/snippy_clean_full_aln/4.5.0+galaxy1
4.5.0+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/snippy/snippy_clean_full_aln/4.5.0+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/snippy/snippy_clean_full_aln/4.4.5+galaxy0
snippy_clean_full_aln
Requirements (dependencies defined in the <requirements> tag set)
name version type
snippy 4.5.0 package
tar 1.32 package
Additional information about this tool
snippy-clean_full_aln
            '${full_aln}'
            #if $custom_char.custom_char_selector:
              --to '${custom_char.to_char}'
            #end if
            > '${clean_full_aln}'
    
None
False
Functional tests
name inputs outputs required files
Test-1 full_aln: core.full.nonclean.aln
name: value
core.full.nonclean.aln
value
Test-2 full_aln: core.full.nonclean.aln
custom_char|to_char: X
custom_char|custom_char_selector: True
name: value
core.full.nonclean.aln
value