| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/martasampaio/phagepromoter/get_proms/0.1.0 (this tool) |
| get_proms |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| biopython | 1.72 | package |
| scikit-learn | 0.21.3 | package |
| numpy | not provided | package |
| pandas | not provided | package |
| Additional information about this tool |
phagepromoter.py "$input_type.genome_format" "$genome" "$both" "$threshold" "$family" "$bacteria" "$lifecycle"
"$adv.model"
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_type|genome: NC_015264.gb input_type|genome_format: genbank both: False threshold: 0.50 family: Podoviridae bacteria: Pseudomonas lifecycle: virulent adv|model: SVM2400 |
name: value name: value name: value |
NC_015264.gb value |