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Repository revision

Revision: 3:a9d8f69d59fb

Repository 'fetch_fasta_from_ncbi'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi

Retrieve FASTA from NCBI tool metadata

Miscellaneous

Name: Retrieve FASTA from NCBI

Description:

Id: retrieve_fasta_from_NCBI

Guid: toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/0.9.4

Version: 0.9.4

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/1.0.0

toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/0.9.4 (this tool)

toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/0.9.3

toolshed.g2.bx.psu.edu/repos/drosofff/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/0.9.2

retrieve_fasta_from_NCBI

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Functional tests

name

inputs

outputs

required files

Test-1

queryString: 9629650[gi]
dbname: nuccore

outfilename: output.fa

output.fa