Repository revision

Revision: 6:e07176c0925d

Repository 'hmmer_nhmmscan'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan

nhmmscan tool metadata

Miscellaneous

Name: nhmmscan

Description: search DNA sequence(s) against a DNA profile database

Id: hmmer_nhmmscan

Guid: toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.3.2+galaxy0

Version: 3.3.2+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.3.2+galaxy1

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.3.2+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.3+galaxy1

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.3

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.2

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/3.1b2

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_nhmmscan/hmmer_nhmmscan/0.1.0

hmmer_nhmmscan

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

hmmer

3.3.2

package

Functional tests

name

inputs

outputs

required files

Test-1

input_hmm_conditional|hmmfile: MADE1.hmm
input_hmm_conditional|input_hmm_source: history
seqfile: dna_target.fa
notextw: True
seed: 4

name: value
name: value
name: value

MADE1.hmm
dna_target.fa
value