| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_consensusid/ConsensusID/2.6+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_consensusid/ConsensusID/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_consensusid/ConsensusID/2.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_consensusid/ConsensusID/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_consensusid/ConsensusID/2.1.0 |
| ConsensusID |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: ConsensusID_1_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: PEPMatrix filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: PAM30MS PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_1_input.idXML value |
| Test-2 |
in: ConsensusID_2_input.featureXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: average filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_2_input.featureXML value |
| Test-3 |
in: ConsensusID_3_input.consensusXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: best filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_3_input.consensusXML value |
| Test-4 |
in: ConsensusID_1_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: PEPMatrix filter|considered_hits: 6 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_1_input.idXML value |
| Test-5 |
in: ConsensusID_1_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: PEPIons filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_1_input.idXML value |
| Test-6 |
in: ConsensusID_1_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: False algorithm: best filter|considered_hits: 0 filter|min_support: 0.5 filter|count_empty: False filter|keep_old_scores: False PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_1_input.idXML value |
| Test-7 |
in: ConsensusID_6_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: True algorithm: best filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: True PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_6_input.idXML value |
| Test-8 |
in: ConsensusID_8_input.idXML rt_delta: 0.1 mz_delta: 0.1 per_spectrum: True algorithm: best filter|considered_hits: 0 filter|min_support: 0.0 filter|count_empty: False filter|keep_old_scores: True PEPIons|mass_tolerance: 0.5 PEPIons|min_shared: 2 PEPMatrix|matrix: identity PEPMatrix|penalty: 5 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
ConsensusID_8_input.idXML value |