Repository revision
11:9871104ea630

Repository 'trinity_samples_qccheck'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck

RNASeq samples quality check tool metadata
Miscellaneous
RNASeq samples quality check
for transcript quantification
trinity_samples_qccheck
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.8.4
2.8.4
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.8.5
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.8.4 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.8.3
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.6.6
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.4.0.0
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.2.0.1
toolshed.g2.bx.psu.edu/repos/iuc/trinity_samples_qccheck/trinity_samples_qccheck/2.2.0.0
trinity_samples_qccheck
Requirements (dependencies defined in the <requirements> tag set)
name version type
trinity 2.8.4 package
bioconductor-biobase 2.38.0 package
bioconductor-qvalue 2.10.0 package
r-cluster 2.0.6 package
r-fastcluster 1.1.24 package
Functional tests
name inputs outputs required files
Test-1 matrix: count/qcheck/matrix.counts.matrix
samples: count/samples.txt
 count/qcheck/matrix.counts.matrix
count/samples.txt